Research Associate in Synthetic Biology of Phages @ Flinders University

Employer : Flinders University

Closing date: 26/09/2025
Brief position description:    
The Flinders Accelerator for Microbiome Exploration (FAME) is seeking a Research Associate in Synthetic Biology of Phages with expertise in bacterial genetics and molecular biology. This position will contribute to pioneering work in developing designer bacteriophages from metagenomic sequences, with the goal of combating antimicrobial resistance and advancing microbiome research.

The Research Associate will:
• Apply advanced molecular biology techniques (e.g., Gibson assembly, Golden Gate cloning, CRISPR-Cas) to engineer and manipulate bacteriophages.
• Collaborate with Chief Investigator, students, and research partners to design and deliver high-impact research outcomes.
• Contribute to publications, grant applications, and the development of new research collaborations at national and international levels.

Job website: https://flinders.wd3.myworkdayjobs.com/en-US/flinders_employment/job/Bedford-Park--Kaurna-Country/Research-Associate-in-in-Synthetic-Biology-of-Phages_JR0000014438

Contact name: Brett Clarke

Contact email:  brett.clarke@flinders.edu.au

Research Associate in Phage Gene Regulation @ Flinders University

Employer : Flinders University

Closing date: 26/09/2025
Brief position description:    
The Flinders Accelerator for Microbiome Exploration (FAME) is seeking a Research Associate in Phage Gene Regulation with expertise in molecular microbiology and protein biochemistry. This position will design and implement cutting-edge assays to explore how bacteriophages regulate their life cycle and respond to environmental signals, combining wet-lab and computational biology approaches.

The Research Associate will:
• Conduct molecular biology and protein-DNA interaction experiments (e.g. EMSA, protein purification, functional screens).
• Integrate laboratory findings with bioinformatics analyses such as motif discovery and comparative genomics.
• Collaborate with Chief Investigator, students, and partners to deliver impactful research outcomes. 

Job website: https://flinders.wd3.myworkdayjobs.com/en-US/flinders_employment/job/Bedford-Park--Kaurna-Country/Research-Associate-in-Phage-Gene-Regulation_JR0000014434

Contact name: Brett Clarke

Contact email:  brett.clarke@flinders.edu.au

Research Associate in Computational Genomics @ Flinders University

Employer : Flinders University

Closing date: 26/09/2025
Brief position description:    
The Flinders Accelerator for Microbiome Exploration (FAME) is seeking a Research Associate in Computational Genomics to develop next-generation bioinformatics tools for genome and metagenome analysis. This position will leverage AI, protein language models, and structural predictions to annotate unknown phage and microbe proteins, and create HPC-optimised pipelines for large-scale biological datasets.

The Research Associate will:
• Design and implement high-performance workflows integrating GPU programming, deep learning, and large-scale data integration.
• Apply advanced methods such as ColabFold, ESM/ProtT5 embeddings, and neural network architectures to predict protein function.
• Collaborate with the Chief Investigator, students, and research partners to deliver impactful research outcomes.

Job website: https://flinders.wd3.myworkdayjobs.com/en-US/flinders_employment/job/Bedford-Park--Kaurna-Country/Research-Associate-in-Computational-Genomics_JR0000014437

Contact name: Brett Clarke

Contact email:  brett.clarke@flinders.edu.au

Brain cancer molecular scientist @ Chris O’Brien Lifehouse

Employer :  Chris O’Brien Lifehouse

Closing date: 31/07/2025
Brief position description:    
This role will mainly contribute to Sydney Brain Tumour Program’s establishment of Nanopore sequencing-based diagnostics. Working with the Molecular Neuropathology service at Royal Prince Alfred Hospital and the brain cancer research team at Chris O’Brien Lifehouse, the Brain Cancer Molecular Scientist will be pivotal in establishing bioinformatics pipelines for brain tumour diagnostics, and optimising wet laboratory protocols for Nanopore sequencing. Other duties may include experimental analyses, data collection, statistics, research paper preparation and other general laboratory support

Key Responsibilities
Establish a diagnostic pipeline for Nanopore sequencing-based brain tumour diagnostics
Establish protocols to ensure consistent and accurate application of diagnostic pipeline
Work with key players in establishing and implementing pipeline
Research contributions

To be successful in this role you will need:
-Bachelor or higher degree in Science/Biomedical Science or an equivalent qualification from a recognised tertiary institution.
-Collegial approach displaying well-developed interpersonal and communication skills.
-Demonstrated experience in bioinformatics, with particular focus on long-read sequencing data handling, processing and analysis
-Well-grounded experience in DNA extraction, library preparation and other molecular techniques
-Demonstrated track record of working in a team with flexibility and respect. Experience in knowing when to seek advice from more senior colleagues.
-Ability to work in a responsible and efficient manner and manage competing priorities to meet deadlines and having the capacity to deliver results within specified timeframes.
-Display initiative, problem solving and analytical skills including an ability to apply established principles in a genetic laboratory environment
-Sound understanding of accreditation and quality assurance requirements that impact the laboratory environment including WHS and privacy requirements
-Compliance with Category A immunization requirements

Desirable:
-Prior experience in a NATA-accredited molecular testing laboratory
-Prior experience in data analysis using multiple analytic platforms
-Demonstrated ability to learn new techniques, including ability to work with and integrate a variety of data types

Job website: http://www.seek.com.au/job/85763551?ref=cm-ui

Contact name:  Laveniya Satgunaseelan

Contact email:  laveniya.satgunaseelan@health.nsw.gov.au

Bioinformatician @ INSiGENe Pty Ltd

Employer :   INSiGENe Pty Ltd

Closing date:  This position will remain open until filled.
Brief position description:    INSiGENe Pty Ltd is at the forefront of delivering innovative bioinformatics solutions that empower medical researchers in academia and industry to extract novel insights from complex omics data and accelerate the understanding of disease mechanisms. We are seeking a highly motivated bioinformatician to join our dynamic, interdisciplinary data science team.

Key Responsibilities
• Design and Analysis: Lead the design, analysis, and in-depth interpretation of datasets from a variety of omics platforms (e.g. single-cell genomics, epigenetics, transcriptomics, proteomics, metabolomics) through single layer analysis and multi-omics integration.
• Innovation: Apply creative bioinformatics solutions to uncover key cellular and molecular events driving disease.
• Collaboration: Work closely with researchers to translate complex data into actionable biological insights.

Qualifications
• PhD in Bioinformatics, Computational Biology, Systems Biology, Computer Science, Data Science, Biostatistics, or a related discipline.
• Experience: Proven track record in the analysis of multi-omics and/or single-cell genomics data.
• Knowledge: Strong understanding of molecular biology and a keen interest in the pathogenesis of complex diseases and traits.
• Reproducibility: Experience with reproducible workflows is highly desirable.
• Publications: Demonstrated record of publication in reputable scientific journals is preferred.

Why Join INSiGENe?
• Flexible Work: Enjoy flexible working arrangements, including work-from-home.
• Supportive Culture: Thrive in a collaborative, early-stage startup environment founded by academic researchers.
• Generous Leave: Benefit from extra time off during the Christmas break.
• Location: Based in Perth, Western Australia, or remote within Australia.
• Employment Type: Full-time, part-time, or contract-based options available.

Compensation: A competitive salary will be offered, commensurate with skills and experience.

How to Apply
Interested candidates are invited to submit their CV and a cover letter to: info@insigene.com. 

Applications without a cover letter will not be considered.

Closing Date: This position will remain open until filled.

Job website:   https://smex-ctp.trendmicro.com:443/wis/clicktime/v1/query?url=http%3a%2f%2finsigene.com&umid=cc6b965a-cb37-42fd-80cf-ea5f4a5cf78a&auth=6ee66d642a212b82964c9073f0dd934b55317413-7f0c3af6b3c61d5be52986f86c3665f0d241c2ab

Contact name: Anthony Bosco

Contact email: anthony.bosco@insigene.com

Bioinformatics Research Assistant @ Monash University

Employer :   Monash University

Closing date:  29/06/2025
Brief position description:    The Goode and Kwan Laboratories at the Monash Biomedicine Discovery Institute are seeking a motivated and talented full-time Research Assistant to contribute to cutting-edge cancer research. 

In this exciting role, you will join a team at the forefront of translational cancer research by developing and applying innovative bioinformatics methods for multi-omics data analysis. Your work will encompass diverse modalities, including genomic, epigenomic, transcriptomic, and spatial proteomic (e.g. multiplex immunohistochemistry) data derived from tissue and liquid biopsy samples across laboratory and clinical studies.

You will be embedded within a collaborative, multidisciplinary team with strong links to Monash Health, Eastern Health, the Peter MacCallum Cancer Centre, and the Walter and Eliza Hall Institute of Medical Research. This is a unique opportunity to make a meaningful impact across a wide range of cancer bioinformatics projects. Your work will contribute to the search for better treatments for cancer patients. 

Reach out to either of us if you’re keen or would like to know more (david.goode@monash.edu | edmond.kwan@monash.edu) — and feel free to share with anyone who might be a great fit!

Job website:   http://careers.pageuppeople.com/513/cw/en/job/678430/bioinformatics-research-assistant

Contact name:   David Goode

Contact email: david.goode@monash.edu

Bioinformatician @ SAHMRI

Employer :  SAHMRI

Closing date:   22/06/2025
Brief position description:    Full-Time, 2-Year Contract

The South Australian Genomics Centre (SAGC) is a national, multi-institutional facility supported by Bioplatforms Australia through the Australian Government’s National Collaborative Research Infrastructure Strategy (NCRIS) initiative. Based in Adelaide, we bring together a team of ~16 genomics and bioinformatics specialists working across agriculture, healthcare, ecology and more. We’re committed to delivering innovative, high-impact genomics solutions.


About the Role
We’re looking for an entry-level postdoctoral researcher or experienced MSc-level bioinformatician to join our collaborative team.
In this role, you'll:
• Conduct end-to-end bioinformatics analyses on a wide range of projects
• Develop reproducible, standardised workflows and pipelines
• Collaborate on research publications and grant applications
• Engage with diverse data from cutting-edge genomics technologies
• Build deep expertise in a specialist area of bioinformatics

You’ll thrive in a fast-paced, multi-project environment with the support and mentorship to grow professionally.

Key Responsibilities
• Provide bioinformatics support across client projects
• Build and maintain analysis pipelines using best practices
• Draft scientific reports and contribute to publications
• Work closely with genomics staff and researchers from varied disciplines


About You
The successful candidate will possess the following key attributes:

Essential:
• MSc, PhD or equivalent in bioinformatics, computer science, statistics, physics, or related field
• Experience with scripting languages (e.g., Python, R, bash, Perl)
• Familiar with version control, containerisation (Docker/Singularity), and workflow systems (e.g., Nextflow)
• Excellent organisation, time management, and communication skills
• Able to manage multiple projects and work both independently and in teams
• Prior experience with HPC environments




Desirable:
• Expertise in one or more of the following: RNA-seq, genome assembly, metagenomics, multi-omics, or data visualisation
• Experience in client-focused roles
• Familiarity with cloud computing, Linux admin, or additional programming languages (e.g., C++, Java, Rust)
• Background in biomedical, agricultural, or environmental research


What We Offer
• Competitive salary with salary packaging up to $15,900 through Maxxia
• Flexible work arrangements to support work life balance
• Exposure to diverse research fields and technologies
• Career development support, including training, publishing, and grant opportunities
• A collaborative, values-driven work environment
• A chance to contribute to real-world impact through genomics research

Our Culture and Values
Everything we do is underpinned by our core values and our institute is dedicated to grow a culture that pursues, enables and demands research excellence. We are proud of the work we do and work hard as a team to make a positive difference to the community. Our values of excellence, innovation, courage, integrity and teamwork are what help us achieve our goals. 
If these are also your values and goals, apply today.

Apply Now
If you are passionate about advancing genomics research and thrive in a collaborative environment, we want to hear from you.

For a confidential discussion, please contact Sen Wang, SA Genomics Centre Manager at Sen.Wang@sahmri.com 

For a copy of the position description, please view the vacancy on the SAHMRI website https://smex-ctp.trendmicro.com:443/wis/clicktime/v1/query?url=https%3a%2f%2fsahmri.org.au%2fcareers%2dand%2dstudy%2fworking%2dat%2dsahmri%2fvacancies&umid=cd59f4b2-7e37-437c-b730-59c401d6dc20&auth=6ee66d642a212b82964c9073f0dd934b55317413-2932337f9a48de336a60650e8eab7b47bc84e769

To apply: please visit the SAHMRI website here: https://aurecruitment.actionhrm.com/myrecruit/newApplicationWizard.htm?pc=PiFGl1rvUtmXihP8P_bQrQxx


Applications close: Sunday 22nd June 2025.
Early applications are encouraged as the role may close earlier if filled.

Aboriginal and Torres Strait Islander people are strongly encouraged to apply 
To learn more about salary packaging, visit the Maxxia website.

Job website:  https://aurecruitment.actionhrm.com/myrecruit/newApplicationWizard.htm?pc=PiFGl1rvUtmXihP8P_bQrQxx

Contact name:  Sen Wang

Contact email: sen.wang@sahmri.com

PhD recruitment - Efficient construction and visualisation of pangenomes for crops with large genomes @ The University of Adelaide - Analytics for the Australian Grain Industry (AAGI)

Employer :  The University of Adelaide - Analytics for the Australian Grain Industry (AAGI)

Closing date:  Open until filled
Brief position description:  

The Analytics for the Australian Grains Industry (AAGI) initiative is a five-year strategic partnership to enhance the profitability and global competitiveness of the Australian grains sector through advanced analytics. The University of Adelaide, in collaboration with Curtin University, the University of Queensland and other research institutions, is leveraging machine learning, data fusion, and statistics to support grain growers in making data-driven decisions.

We are recruiting one PhD candidate for the project "Efficient construction and visualisation of pangenomes for crops with large genomes." Pangenomes are highly relevant for grain RD&E pre-breeding research because they capture the full spectrum of genetic diversity within a species, going beyond the limitations of single-reference genomes. By integrating multiple genomes from different individuals or populations, pangenomes provide a more comprehensive understanding of gene presence/absence, structural variations, and evolutionary dynamics. 

In this project we will aim to develop novel dynamic programming computational methods for pangenome assembly of diploid and polyploid crop species and benchmark them against other methods such as graph-based methods. This project will combine algorithm development and computational programming with large population genomes. Candidates will work within a vibrant cutting-edge analytics team that delivers technologies back to the Australian grains industry research to maximise benefits for farmers and growers. This research project will also be highly collaborative with major partners, Curtin University and the University of Western Australia. Through these linkages, there will also be an opportunity to develop the research further into a practical web-based visualisation tool to represent pangenome and structural variations.

Job website: http://scholarships.adelaide.edu.au/Scholarships/postgraduate-research/faculty-of-sciences-engineering-and-technology-set/analytics

Contact name:   Sandy Khor

Contact email:  sandy.khor@adelaide.edu.au

CSIRO Industry PhD - Prediction of molecular interactions with RNA using AI for basic research and therapeutic discovery @ ANU - CSIRO - RNAfold.ai

Employer : ANU - CSIRO - RNAfold.ai

Closing date:  Open until filled
Brief position description:  

This project aims to develop advanced deep-learning models to predict interactions between ribonucleic acid (RNA) and other molecules. These models will help decode RNA interaction networks involved in fundamental cellular processes and disease mechanisms and identify novel therapeutic strategies. The outcomes will enable more precise design of RNA-targeting drugs, accelerating the development of next-generation therapeutics.

Job website:  http://science.anu.edu.au/study/research/iPhD

Contact name:     Eduardo Eyras

Contact email:   eduardo.eyras@anu.edu.au